I did several searches on this subject and nothing satisfactory turned up.
Is there a How-To for setting up a desk top to Zaurus wifi link?
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Well, assuming your network connection is up and going, there are any number of ways to go about it. Remember the Zaurus is a handheld linux machine, so you can really do anything you would from a desktop linux station; there are pre-built packages available for most things you could want.
Generally, I either use ssh to go to/from my linux fileservers, and smbmount to mount windows shares on my Zaurus. You could install a ssh server on the Z, and copy to from the desktop too.
And of course, there is the file transfer option from the Z Desktop.